I wanted to be able to have customer register on my site, but I didn't want the "create a new acount" visible. So I went to settings, and created a new template for the login page.
click on the "manage" button for the "login template" drop list
duplicate the default template
edit the new template by removing the anonymousRegistration link code: <tmpl_if anonymousRegistration.isAllowed> <li><a href="<tmpl_var createAccount.url>"><tmpl_var createAccount.label></a></li> </tmpl_if>
save.
commit your changes
Go back to settings and use the new login page template you just created.